Andrew Paterson

Email: paterson@uga.edu

Professor and Director,University of Georgia, USA

Andrew Paterson is jointly appointed in three departments: Crop and Soil Science, Plant
Biology, and Genetics at the University of Georgia, USA. Trained as a classical plant
breeder, his career has been spent working in partnership with both applied and basic
scientists to develop genomic tools and approaches as well as their application to goals
ranging from applied crop improvement to understanding angiosperm evolutionary history.

Professor Paterson and his collaborators have contributed to genetic analysis and improvement
of agriculturally important traits in sorghum, cotton, peanut, sugarcane, Brassica, maize, rice, and
other crops. In his future work, he seeks to (1) partner with African scientists in the analysis and
improvement of ‘orphan’ crops, leveraging hard-won information from well-studied botanical
models; (2) engage the organismal experience and knowledge of African scientists with genomic
tools and approaches to invigorate improvement of sorghum, cotton, and other important crops,
and; (3) further explore the origin and evolution 0of botanical diversity, with an emphasis on roles of
polyploidy.

Curriculum Vitae

 

Name: Prof. Andrew Paterson

Country of birth:

Nationality:  

Position Title: Professor and Director

Institution: University of Georgia, USA

Contact Address:

Plant Genome Mapping Laboratory 111 Riverbend Road Athens, GA 30602-6810

Email: paterson@uga.edu

Tel: +001 706-583-0162

Fax: +001 706-583-0160

Specialty Area:

-          Plant Breeding

 

Education:

1988  Ph.D., Cornell University, USA

 

Positions held (since terminal degree):

 

2008 to date  Head, Plant Genome Mapping, University of Georgia, USA

 

2002 to date  Distinguished Research Professor, University of Georgia, USA

 

1999 - 2002   Professor, Departments of Crop and Soil Sciences; Plant Biology; Genetics, University of Georgia, USA

 

1998 - 1999  Professor, Department of Soil and Crop Sciences, Texas A&M University, USA

 

1996  Appointed to Christine Richardson Endowed Professorship, Texas A&M University, USA

 

1995 - 1996   Associate Professor, Department of Soil and Crop Sciences, Texas A&M University, USA

 

1991 - 1995   Assistant Professor, Department of Soil and Crop Sciences, Texas A&M University, USA

 

1989 - 1991  Adjunct Assistant Professor of Plant Molecular Biology, University of Delaware, USA

 

1989 - 1991  Principal investigator, Agriculture Biotechnology, E.I. DuPont de Nemours and Company

 

1987 - 1989   Postdoctoral associate, Cornell University, USA

 

Expertise:

 

-          Eluciadating plant biodiversity at genic and genomic level

-          Identification and implementation of DNA diagnostic tools

 

 

Honors and Awards (since terminal degree):

 

1995  Marquis Who is Who in American Science and Engineering .

2006  Who's Who in Agriculture Higher Education (AcademicKeys) .

2010  International Cotton Genome Initiative Award for Outstanding Contributions to Cotton Genomics .

2009  Lamar Dodd Award, for internationally recognized research in the sciences, University of Georgia .

2009  Distinguished Alumni Award .

2009  Graduate School Outstanding Mentoring Award selection committee .

2008  Fellow, American Association for the Advancement of Science (AAAS) .

2008  Cotton Genetics Research Award, National Cotton Council .

2007  Guggenheim Foundation Fellow, Plant Sciences .

2005  D. W. Brooks Award for Excellence in Research, University of Georgia .

2002  Cotton Biotechnology award (inaugural recipient). .

1997  Elected to Gamma Sigma Delta, Texas A&M chapter. .

1997  Early Career Award .

1996  Young Crop Scientist of the Year, Crop Science Society of America .

1996  F. Patterson Distinguished Speaker .

1996  Founding member .

1996  Elected Vice-President for Public Research, Professional Association for Cactus Development (PACD) .

1993  Elected to Council of Principal Investigators, Texas A&M University, USA .

 

A selection of major research accomplishments: Discoveries and first reports

 

 

 

A Selection of refereed journal publications (2002-present)

 

Bowers, J.E., B.A. Chapman, J.K. Rong and A.H. Paterson. 2003. Unravelling angiosperm genomeevolution by phylogenetic analysis of chromosomal duplication events. Nature 422: 433-438.

 

Hu, F.Y., D.Y. Tao, E. Sacks, B.Y. Fu, P. Xu, J. Li, Y. Yang, K. McNally, G.S. Khush, A.H.Paterson and Z.K. Li. 2003. Convergent evolution of perenniality in rice and sorghum. Proc.Natl. Acad. Sci. USA 100: 4050-4054.

 

Bowers, J.E., C. Abbey, S. Anderson, C. Chang, X. Draye, A.H. Hoppe, R. Jessup, C. Lemke, J.Lennington, Z.K. Li, Y.R. Lin, S.C. Liu, L.J. Luo, B.S. Marler, R.G. Ming, S.E. Mitchell, D.Qiang, K. Reischmann, S.R. Schulze, D.N. Skinner, Y.W. Wang, S. Kresovich, K.F. Schertzand A.H. Paterson. 2003. A high-density genetic recombination map of sequence-tagged sitesfor Sorghum, as a framework for comparative structural and evolutionary genomics of tropicalgrains and grasses. Genetics 165: 367-386.

 

Liu, Z.Y., P.H. Moore, H. Ma, C.M. Ackerman, M. Ragiba, Q.Y. Yu, H.M. Pearl, M.S. Kim, J.W.Charlton, J.I. Stiles, F.T. Zee, A.H. Paterson, and R. Ming. 2004. A primitive Y chromosomein papaya marks incipient sex chromosome evolution. Nature 427: 348-352.

 

Saranga, Y., C.X Jiang., R.J. Wright, D. Yakir and A.H. Paterson. 2004. Genetic dissection of cottonphysiological responses to arid conditions and their inter-relationships with productivity. PlantCell and Environment 27: 263-277.

 

Ma, H., P.H. Moore, Z.Y. Liu, M.S. Kim, Q.Y. Yu, M.M.M. Fitch, T. Sekioka, A.H. Paterson and R.Ming. 2004. High-density linkage mapping revealed suppression of recombination at the sexdetermination locus in papaya. Genetics 166: 419-436.

 

Rong, J.K., C. Abbey, J.E. Bowers, C.L. Brubaker, C. Chang, P.W. Chee, T.A. Delmonte, X.L.Ding, J.J. Garza, B.S. Marler, C.H. Park, G.J. Pierce, K.M. Rainey, V.K. Rastogi, S.R. Schulze,N.L. Trolinder, J.F. Wendel, T.A. Wilkins, T.D. Williams-Coplin, R.A. Wing, R.J. Wright,X.P. Zhao, L.H. Zhu and A.H. Paterson. 2004. A 3347-locus genetic recombination map ofsequence-tagged sites reveals features of genome organization, transmission and evolution ofcotton (Gossypium). Genetics 166: 389-417.

 

Hamblin, M.T., S.E. Mitchell, G.M. White, W. Gallego, R. Kukatla, R.A. Wing, A.H. Patersonand S. Kresovich. 2004. Comparative population genetics of the panicoid grasses: Sequencepolymorphism, linkage disequilibrium and selection in a diverse sample of Sorghum bicolor.Genetics 167: 471-483.

 

Paterson, A.H., J.E. Bowers and B.A.Chapman. 2004. Ancient polyploidization predatingdivergence of the cereals, and its consequences for comparative genomics. Proc. Natl.Acad. Sci. USA 101: 9903-9908.

 

Rong J., J.E. Bowers, S.R. Schulze, V.N. Waghmare, C.J. Rogers, G.J. Pierce, H. Zhang, J.C. Estilland A.H. Paterson. 2005. Comparative genomics of Gossypium and Arabidopsis: Unraveling theconsequences of both ancient and recent polyploidy. Genome Research 15: 1198-1210.

 

Rong, J.K., G.J. Pierce, V.N. Waghmare, C.A.J. Rogers, A. Desai, P.W. Chee, O.L. May, J.R.Gannaway, J.F. Wendel, T.A. Wilkins and A.H. Paterson. 2005. TAG 111: 1137-1146.

 

Yuksel, B., J.C. Estill, S.R. Schulze and A.H. Paterson. 2005. Organization and evolution ofresistance gene analogs in peanut. Molecular Genetics and Genomics 274: 248-263.

 

Bowers, J.E., (33 authors, A.H. Paterson as corresponding author). 2005. Comparative physicalmapping links conservation of microsynteny to chromosome structure and recombination ingrasses. Proc. Natl. Acad. Sci. USA 102: 13206-13211.

 

Van Becelaere, G., E.L. Lubbers, A.H. Paterson and P.W. Chee. 2005. Pedigree versus DNAmarker-based genetic similarity estimates in cotton. Crop Science 45: 2281-2287.

 

Hamblin, M.T., M.G. Salas-Fernandez, A.M. Casa, S.E. Mitchell, C.F. Aquadro, A.H. Paterson andS. Kresovich. 2005. Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor. Genetics 171: 1247-1256.

 

Jang, C.S., T.L. Kamps, D.N. Skinner, S.R. Schulze, W.K. Vencill and A.H. Paterson. 2006.Functional classification, genomic organization, putative cis-acting regulatory elements, andrelationship to quantitative trait loci, of Sorghum genes with rhizome-enriched expression. PlantPhysiology 142: 1148-1159.

 

Takamiya, T., A.H. Paterson and H. Okuizumi. 2006. Restriction landmark genomic scanning withisoschizomers (MspI/HpaII) for DNA methylation analysis. Electrophoresis 27: 2846-2856.

 

Gingle, A.R., H. Yang, P. Chee, O.L. May, J. Rong, D.T. Bowman, E.L. Lubbers and A.H. Paterson.An integrated web resource for cotton. Crop Science 46: 1998-2007.

 

Feltus, F.A., H.P. Singh, H.C. Lohithaswa, S.R. Schulze, T. Silva and A.H. Paterson. 2006. Acomparative genomics strategy for targeted discovery of single-nucleotide polymorphisms andconserved noncoding sequences in orphan crops. Plant Physiology 140: 1183-1191.

 

Hamblin, M.T., A.M. Casa, H. Sun, S.C. Murray, A.H. Paterson, C.F. Aquadro and S. Kresovich.2006. Challenges of detecting directional selection after a domestication bottleneck: lessonsfrom Sorghum bicolor. Genetics 173: 953-954.

 

Feltus, F.A., G.E. Hart, K.F. Schertz, A.M. Casa, P. Brown, P. Klein, S. Kresovich and A.H.Paterson. 2006. Genetic map alignment and QTL correspondence between inter- and intra-specific Sorghum populations. Theor. Appl. Genet. 112: 1295-1305.

 

Chapman, B.A., J.E. Bowers, F.A. Feltus and A.H. Paterson. 2006. Buffering crucial functionsby paleologous duplicated genes may impart cyclicality to angiosperm genome duplication.Proceedings of the National Academy of Sciences of the USA 103: 2730-2735.

 

Bethel, C.M., E.B. Sciara, J.E. Bowers, J.C. Estill, W. Hanna and A.H. Paterson. 2006. A frameworklinkage map of Bermudagrass (Cynodon dactylon x transvaalensis) based on single-dose restrictionfragments. Theor. Appl. Genet. 112: 727-737.

 

Udall, J.A., J. Swanson, K. Haller, R.A. Rapp, M. Sparks, J. Hatfield, Y. Yu, Y. Wu, D.J. Llewellyn,E. Dennis, A.B. Arpat, B. Sickler, T. A. Wilkins, J. Guo, X. Chen, E. Taliercio, R. Turley, C.Dowd, H. Mcfadden, N. Klueva, P. Payton, R. Allen, D. Zhang, C. Haigler, C. Wilkerson, J.Suo, S. R. Schulze, M. Pierce, M. Essenberg, H. Kim, D. Kudrna, R. Wing, A.H. Paterson, C.Soderlund and J.F. Wendel. 2006. A global assembly of cotton ESTs. Genome Research 16: 441-450.

 

Paterson, A.H. 2006. Leafing through the genomes of our major crop plants: strategies forcapturing unique infomation. Nature Reviews Genetics 7: 174-184.

 

Desai, A., P.W. Chee, J. Rong, O.L. May and A.H. Paterson. 2006. Chromosome structural changesin diploid and tetraploid A genomes of Gossypium. Genome 49: 336-345.

 

Wei, F., E. Coe, W. Nelson, A. Bharti, F. Engler, E. Butler, H.-R. Kim, J.L. Goicoechea, M. Chen, S.Lee, G. Fuks, H. Sanchez-Villeda, S. Schroeder, Z. Fang, M. McMullen, G. Davis, J. Bowers,A. Paterson, M. Schaeffer, J. Gardiner, K. Cone, J. Messing, C. Soderlund and R. Wing. 2007.Physical and genetic structure of the maize genome reflects its complex evolutionary history.PLoS Genetics 3: 1254-1263.

 

Rong, J., F.A. Feltus, V.N. Waghmare, G.J. Pierce, P.W. Chee, X. Draye, Y. Saranga, R.J. Wright,T.A. Wilkins, O.L. May, C.W. Smith, J.R. Gannaway, J.F. Wendel and A.H. Paterson. Meta-analysis of polyploid cotton QTLs shows unequal contributions of subgenomes to a complexnetwork of genes and gene clusters implicated in lint fiber development. Genetics 176: 2577-2588.

 

Yu, Q., S. Hou, R. Hobza, F.A. Feltus, X. Wang, W. Jing, R.L. Skelton, A. Blas, C. Lemke, J.H. Saw,P.H. Moore, M. Alam, J. Jiang, A.H. Paterson and R. Ming. 2007. Chromosomal location andgene paucity of the male-specific region on the papaya Y chromosome. Mol. Gen. Genet. 278:177-185.

 

Mei, H., F. Feng, B. Lu, F.A. Feltus, A.H. Paterson, X. Cai, L. Chen, X. Xu, J. Wu, X. Yu, H. Chen,Y. Li and L. Luo. 2007. Experimental validation of inter-subspecific genetic diversity in ricerepresented by the differences between the DNA sequences of ‘Nipponbare’ and ‘93-11.’ Chinese Science Bulletin 52: 1327-1337.

 

Yang, T.J., S.-J. Kwon, J. Kim, K.-B. Lim, J.-A. Kim, M. Jin, J.Y. Park, M.-H. Lim, H.-I. Kim, Y.P.Lim, A.H. Paterson and B.-S.Park. 2007. Characterization and genome-wide comparativeanalysis of terminal-repeat retrotransposon in miniature (TRIM) families in the Brassicaceae.TAG 114: 627-636.

 

Lohithaswa, H.C., F.A. Feltus, H.P. Singh, C.D. Bacon, C. D. Bailey and A.H. Paterson. 2007.Leveraging rice genome sequence for comparative genomics in monocots. TAG 115: 237-243.

 

Grover, C.E., H.R. Kim, R.A. Wing, A.H. Paterson and J.F. Wendel. 2007. Microcolinearity andgenome evolution in the AdhA region of diploid and polyploid cotton (Gossypium). Plant Journal50: 995-1006.

 

Wang, J., P.H. Moore, A.H. Paterson and R. Ming. 2007. Sex chromosomes in flowering plants.American Journal of Botany 94: 141-150.

 

 

Book chapters:

ur-Rahman, M., M. Asif, T. Shaheen, N. Tabbasum, Y. Zafar, A.H. Paterson. 2011. Marker-assisted Breeding in Higher Plants. Chapter 3 in Sustainable Agriculture Reviews. Springer.

Paterson, A.H. 2010. Roadmap of genomics research in the 21st century. Chapter 17 in C. Kole, ed. Principles and Practices of Plant Genomics III. Science Publishers.

Yehoshua Saranga, Andrew H. Paterson, Avishag Levi. 2009. Classical and Molecular Genetics of Abiotic Stress Resistance in Cotton. Chapter 14 in A. H. Paterson (ed.). Genetics and Genomics of Cotton. Springer NY.

Rong, J., and A. H. Paterson. 2009. Comparative genomics of cotton and Arabidopsis. Chapter 18 in A. H. Paterson (ed.). Genetics and Genomics of Cotton. Springer NY.

A.H. Paterson. 2009. Toward characterizing the spectrum of diversity in the Gossypium genus. Chapter 20 in A. H. Paterson (ed.). Genetics and Genomics of Cotton. Springer NY.

Paterson, A.H. 2009. Rhizomatousness: genes important for a weediness syndrome. Chapter 7 in C. N. Stewart (ed). Genomics of Weedy and Invasive Plants. Blackwell Publishing, Ames IA.

Andrew H. Paterson, ed. 2009. Genetics and Genomics of Cotton. Springer NY.

ur-Rahman, M., Y, Zafar, A.H. Paterson. 2009. Gossypium DNA markers: types, numbers, and uses. Chapter 5 in A. H. Paterson (ed.). Genetics and Genomics of Cotton. Springer NY.

S. M. Brumbley, S. J. Snyman, A. Gnanasambandam, P. Joyce, S. R. Hermann, J. A. G. da Silva, R. B. McQualter, M.-L. Wang , B.T. Egan, A. H. Paterson, H. H. Albert and P. H. Moore. 2008. Sugarcane. Chapter 1 in Kole, C. and T. C. Hall (eds). Compendium of Transgenic Crop Plants: Transgenic Sugar, Tuber and Fiber Crops. Blackwell Publishing, Oxford, UK. pp 1-58.

Paterson, A.H., John E. Bowers, F. Alex. Feltus. 2008. Genomics of Sorghum, a Semi-Arid Cereal and Emerging Model for Tropical Grass Genomics. Chapter 20 in Moore, P. H. and R. Ming (eds). Genomics of Tropical Crops. Springer, New York.

Paterson, A. H. 2008. Plant Genome Mapping and Strategy." In H. Doelle, ed. Encyclopedia for Life Support Systems. UNESCO.

Lin, L, and A. H. Paterson. 2006. Physical organization of the Gossypium genomes. In A. H. Paterson (ed.). Genetics and Genomics of Cotton. Springer NY.

Kuo-Kao Wu, Ray Ming, Paul H. Moore, Andrew H. Paterson. 2006. Sugarcane Genomics and Breeding. in K. R. Lamkey and M. Lee (eds). Plant Breeding. pp 283-292

Paterson, A.H., M. Freeling, T. Sasaki. 2006. Grains of knowledge: genomics of model cereals. Chapter 5 in H. Sussman and M. Smit, (eds). Genomes. Cold Spring Harbor Laboratory Monograph Series, Cold Spring Harbor Laboratory Press, Cold Spring Harbor NY.

Lubbers, E.L., Chee, P.W., Paterson, A.H., and Smith, C.W. 2006. Fiber quality of a near-isogenic introgression line series from an Upland by Pima interspecific cross. In: Beltwide Cotton Conferences. San Antonio, TX. pp. 845-852.

John E. Bowers, Brad A. Chapman and Andrew H. Paterson. 2005. Revealing Angiosperm Diversity, Toward a “Gene Revolution”. In R. Tuberosa, R. Phillips, M. Gale, (eds). In the wake of the double helix: From the Green Revolution to the Gene Revolution. Avenue Media, Bologna, Italy, 722 pgs.

Andrew H. Paterson, H. Tom Stalker, Maria Gallo-Meagher, Mark D. Burow, Sangam L. Dwivedi, Jonathan H. Crouch, Emma S. Mace. 2004. Genomics and genetic enhancement of peanut. Chapter 6 in R. Wilson, H. T. Stalker, C. Brummer (eds). Genomics for Legume Crops. AOCS Press, Champaign, Ill. pp 97-109.

Andrew H. Paterson. 2003. Comparative genomics in cereals. Chapter 5 in PK Gupta and RK Varshney (eds). Cereal genomics. Kluwer, Dordrecht.

Paterson, A. H. and J. L. Bennetzen. 2001. Comparative mapping of plant chromosomes. Chapter 6, in R. Phillips and I. Vasil (eds.). DNA-Based Markers in Plants, Volume 2. Kluwer Academic Press. 512 pgs.

Paterson, A. H. 2000. Polyploidy. In R. Robinson, R. Evans, W. Mechaber, B. Wallace (eds.). Plant Sciences for Students. MacMillan Reference USA, New York NY.

Chapman, B., C. M. Jacobo, R. A. Bunch, A. H. Paterson. Cactus Breeding and Biotechnology. Chapter 15 in P. S. Nobel (ed.). Cacti: Biology and Uses. University of California Press, Los Angeles.

Andrew H. Paterson, ed. 1997. Molecular Dissection of Complex Traits. CRC Press.

Paterson, A. H. 1997. Of Blending, Bristles, and Beans: Molecular Dissection of Complex Traits. Chapter 1, in A.H. Paterson (ed). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Paterson, A.H., D. Lan, S. Liu, S. Kowalski. 1997. High-resolution mapping of QTLs. Chapter 6, in A.H. Paterson (ed). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Paterson, A. H. 1997. DNA marker-assisted plant and animal improvement. Chapter 7, in A.H. Paterson (ed). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Paterson, A. H., Y. Lin, Z. Li, K.F. Schertz. 1997. Case History in Plant Domestication: Evolution of Large-Seeded Cereals. Chapter 15, in A.H. Paterson (ed). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Paterson, AH. 1997. Prospects for Cloning the Genetic Determinants of QTLs. Chapter 25, in A.H. Paterson (ed.). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Liu, SC, YR Lin, JE Irvine, AH Paterson. 1997. Mapping QTLs in autopolyploids (sugarcane). Chapter 4, in A.H. Paterson (ed.). Molecular Dissection of Complex Traits. CRC Press, Boca Raton, FL.

Paterson, A. H., Tien-hung Lan, Terrye A. Delmonte, Stanley P. Kowalski. 1997. Comparative molecular and phenotypic evolution of Brassica oleracea and Arabidopsis thaliana. Acta Horticulturae, in press.

Andrew H. Paterson, ed. 1996. Genome Mapping in Plants. Landes Biomedical Publishing/Academic Press, Austin TX.

Paterson, A.H. 1996. An historical perspective. Chapter 1, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. The DNA revolution. Chapter 2, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. Making a genetic map. Chapter 3, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. Mapping genes responsible for differences in phenotype. Chap. 4, A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. Physical mapping: Bridging the gap between DNA markers and genes. Chapter 5, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. . . . and with what consequences? New opportunities in life sciences research, using a genome-based approach. Chapter 6, A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H. 1996. DNA marker-assisted crop improvement. Chapter 7, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H, J.F. Wendel, and D.M. Stelly. 1996. Status of genome mapping in the Malvaceae (cottons). Chapter 18, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Paterson, A.H., S. Liu, Y. Lin, C. Chang. 1996. Status of genome mapping in the tropical grains and grasses (Poaceae). Chapter 20, in A.H. Paterson (ed.). Genome Mapping in Plants. Landes Bioscience Publishing, Austin, TX.

Osborn, T. and A. H. Paterson. 1994. The Crucifereae. Contribution to "The USDA Plant Genome Research Program", J. Miksche et al (eds). Chapter 1 in Adv. Agronomy. Vol. 56.

Paterson, A. H., J. F. Wendel, and R. J. Kohel. 1994. The Malvaceae. Contribution to "The USDA Plant Genome Research Program", J. Miksche et al (eds.) Chap. 1 in Adv. Agron., Vol. 56.

Scholl, R, KA Feldmann, and AH Paterson. 1994. Quantitative Genetics in Arabidopsis. Chapter 6 in E. Meyerowitz and C. Somerville (eds). Arabidopsis thaliana, Cold Spring Harbor Press, NY.

J. W. DeVerna and A. H. Paterson. 1990. Genetics of Lycopersicon. Chapter 3 in Kalloo, et al. Genetic Improvement of Tomato. (TAG monograph series). Springer-Verlag Press, Berlin.

 

 

Invited presentations at major international conferences (2002-present-Maximum 8)

 

A.H. Paterson. 2010. Sequencing the cotton genomes. Plenary talk, International Cotton Genome Initiative meeting, Canberra, Australia. September 2010.

 

A.H. Paterson. 2010. Accelerating the domestication of dedicated biomass crops. Select Bio, AgriGenomics World Congress. Brussels, Belgium. 8 July 2010.

 

A.H. Paterson. 2010. The sorghum genome, the diversification of cereals, and the productivity of tropical grasses. Intél Conference on Plant Molecular Breeding. Beijing, China. 8 Sept 2010

 

A.H. Paterson. 2010. Presenter and panelist, panel discussion of "Continuous Evolution of Marker Systems " Where would we like to be Generation Challenge Program, Annual Research Meeting. Bamako, Mali. 21 Sept 2009.

 

A.H. Paterson. 2009.Discovery and development of alleles contributing to sorghum drought tolerance. Generation Challenge Program, Challenge Initiative Workshop. Montpellier, France. 10 March 2009.

 

A.H. Paterson. 2008. AgriGenomics World Congress. Amsterdam, Netherlands. 29 Sept 2008.

 

A.H. Paterson. 2008. Applications and opportunities of crop comparative genomics. ABIC. Cork, Ireland. August 2008

 

A.H. Paterson. 2008. Panel discussion on cotton genome sequencing. International Cotton Genome Initiative meeting. China. July 2008.

 

Research Grants (2004 – present):

Funding source

Grant Title (Principal investigators)

Amount US$

Period

USDA-CSREES

(PI.) Growth and development of rhizomes.

$320,000

2010 - 2012

NSF-BDI

(PI.) Plant Genome Duplication Database

$420,000

2009 - 2012

DOE-USDA Plant Feedstocks Program

(PI.) Accelerating the domestication of Miscanthus.

$1.2 million

2009 - 2012

USCP

(PI.) Sorghum Ma1.

$32,500

2009

USCP

(PI.) Sorghum drought resistance.

$32,500

2009

NSF-PFI

(PI.) Scaling a new adaptive peak for cotton.

$599,000

2008 - 2012

CGIAR-Generation Challenge Program

(PI.) Discovery and development of alleles contributing to sorghum drought tolerance.

$756,225

2008 - 2011

CPBR, Mendel Biotech

PI. Improved genomics tools and resources for Miscanthus.

$440,000

2009 - 2010

USDA-CSREES

(PI.) Exploring genetic containment strategies for sorghum transgenes.

$180,000

2008 - 2010

Pakistan-US program (US Dept of State)

(PI.) Integrated genetic/physical mapping of Gossypium.

$160,000

2008 - 2010

CPBR/Dow

(PI.) A TILLING Resource for Cotton.

$300,000

2008 - 2009

USGA

(PI.) Bermudagrass ESTs

$90,000

2006 - 2009

Cotton, Inc.

(PI.) Improving the G. raimondii physical map.

$60.000

2008

ICSB

(PI.) Physical mapping of sugarcane.

$199,500

2005 - 2008

NSF

(PI.) Unraveling angiosperm chromosome evolution.

$489,000

2005 - 2008

CPBR

(PI.) Physical mapping of the sugarcane euchromatin.

$320,000

2006 - 2007

GA Peanut Comm.

(PI.) Peanut resistance genes.

$7,000

2006

US-Egypt Bilateral Program

(PI.) Sample sequence strategy for cotton.

$30,000

2004 - 2006

GA Peanut Comm.

(PI.) Peanut resistance genes.

$7,000

2005

USAID

(PI.) Comparative analysis of functional and anonymous diversity in pearl millet and sorghum.

$150,000

March 2004 - Sept 2005

USDA

(PI.) USDA CAP Conference proposal for cotton

$12,000

2004 - 2005

CPBR

(PI.) SNP discovery in cotton

$200,000

2003 - 2005

NSF

(PI.) (Renewal) Grass Genomic Biodiversity

$3.97 million

2001 - 2005

GA Seed Devt. Comm

(PI.) Toward standards for bermudagrass DNA fingerprinting.

$150,000

2001-2005

NSF

(PI.) FIBR planning grant - -why are so many plants polyploids?

$50,000

2004

CPBR

(PI.) SNP discovery in peanut.

$20,000

2003 - 2004

USAID

(PI.) Comparative analysis of functional and anonymous diversity in pearl millet and sorghum.

$100,000

March 2003 - Sept 2004

USDA

(PI.) Chromosomal and subgenomic distribution of diversity in cotton.

$140,000

2002 - 2004

US-Egypt

(PI.) Molecular characterization of QTLs affecting earliness and fiber characteristics of Egyptian cotton.

$23,500

2002 - 2004

USDA-NRI

(PI.) Organization of cotton genomic diversity.

$140,000

2002 - 2004

NSF

(PI.) BAC resources for comparative biology in angiosperms.

$400,000

2002 - 2004

ICSB

(PI.) Toward a gene map for sugarcane.

$306,000

2001 - 2004

 


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This database is supported with funding from the Bill & Melinda Gates Foundation